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hybrid · semantic + lexical · 4867 datasets ranked · 3.14s

Structuremodal23tabular5composite4sequence4
Depthcataloged4831measured36
Licenseopen4590non commercial146unknown93share alike38
Accessopen4867
Formatpdf4844zip146docx61csv57xlsx43
Sourcezenodo4847zenodo-bio20
clear
21-40 of 4867sortrelevancemeasured firstqualitysize
modal

Single nuclei RNA sequencing of postmortem cingulate cortex, midbrain and motor cortex of healthy donors and Parkinson's disease patients – 10x multiome (snRNA-seq and snATAC-seq).

0.00

Pančíková, Alexandra · Theunis, Koen · Hulselmans, Gert · et al.

png26
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tsv13
fasta10
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netcdf3
torch2
gff1
hdf51
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1 files · 37 KB · pdf

This dataset consists of raw sequencing snRNA-seq data and snATAC-seq data (10x Genomics Chromium Next GEM Multiome ATAC/GEX). The data is part of an overall set of samples derived from postmortem midbrain (n=140), cingulate cortex (n=190) and motor cortex (n=4) of healthy donors (n=114), patients with Parkinson's disease (n=75) or patients with other neurological disorder (n=1). The protocol followed to isolate nuclei from postmortem brain samples and to prepare sequencing libraries can be found below. To increase throughput and to decrease batch effects, several donors have been pooled together into a single sequencing library. To computationally demultiplex the nuclei to their corresponding donors, cellsnp-lite (version commit: aad18644adcde853c313362a856a24245c9b91f7) followed by vireo (https://github.com/single-cell-genetics/vireo/pull/108 ) has been used. The population VCF with the donor genotypes derived from whole genome sequencing data has been used to assign nuclei back to their donors. (edited)

open·CC-BY-4.0·zenodo-bio·completeSource
tabular

Root anatomical traits modulate the assembly and nitrogen transformation potential of root-associated microbiomes in a temperate steppe

0.00

Yuan, Guangyuan

72 rows × 13 cols · 6.0 KB · csv, fasta

11 numeric · 2 categorical

This dataset supports the findings of the manuscript "Root anatomical traits modulate the assembly and nitrogen transformation potential of root-associated microbiomes in a temperate steppe" (NPH-MS-2026-55667). It contains root traits data, bacterial 16S rRNA gene absolute abundances, functional genes relative abundances, DNA extraction metadata, and phylogenetic marker sequences for 37 plant species from a temperate steppe ecosystem. The dataset includes the following files: 1. root traits.csv - Root traits including average diameter (AD), specific root length (SRL), specific root area (SRA), root tissue density (RTD), root nitrogen content (RNC), root carbon content (RCC), carbon‑nitrogen ratio (RCN), cortex layer number (CLN), cortex thickness (CT), and the ratio of cortex thickness to root diameter (CTRD). The first column lists plant species names. 2. Absolute abundance of 16S rRNA gene.csv - Quantitative PCR (qPCR) derived absolute abundances of bacterial 16S rRNA gene copies (copies/ng DNA) across different root compartments (rhizosphere, rhizoplane, endosphere), host species, root orders, and cotyledon classes (monocot/dicot). 3. DNA extraction sample weight.csv - Fresh weight (grams) of root material used for DNA extraction for each sample, linked by SampleID to the abundance data. 4. DNA extraction concentration.csv - Qubit‑measured DNA concentrations (ng/μL) and the sample volume (μL) used for quality control, together with sample metadata. 5. 37species.fasta - DNA sequences of two chloroplast markers (matK and rbcL) for the 37 plant species included in the study. The sequences are in FASTA format with headers formatted as ">Species". These were used for host phylogeny construction and Pagel's λ analyses. 6. Quantitative PCR results of functional gene.csv - Quantitative PCR (qPCR) derived relative abundances of bacterial 16S rRNA gene and functional genes across different root compartments (rhizosphere, rhizoplane, endosphere), host species, root orders, and cotyledon classes (monocot/dicot). 7. README.md - A detailed description of each file, column headers, abbreviations, units, and any missing value codings (NA). All data are provided to ensure transparency and reproducibility of the analyses. For methodological details, please refer to the Materials and Methods section of the associated publication. These data are under embargo until the associated research article is published. After that date, they will be freely available under a Creative Commons Attribution 4.0 International (CC BY 4.0) license. During the embargo period, the metadata (title, authors, abstract) and the DOI remain publicly visible, but the data files are not accessible. For access requests before the embargo expires, please contact the corresponding author.

open·CC-BY-4.0·zenodo-bio·6% null·completeSource
modal

Single-cell RNAseq of human PBMCs from healthy control, RBD, and PD.

0.00

MacDonald, Adam · Stratton, Jo Anne

1 files · 35 KB · pdf

We performed 10X Genomics single-cell RNAsequencing of human prepheral blood mononuclear cells from healthy control, PD and RBD patients. This dataset contains raw FASTQ files. Sequencing was performed using NovaSeq 6000 S4 PE 100bp. Reads were processed using the 10X Genomics Cell Ranger Single Cell 2.0.0 pipeline. FASTQs generated from sequencing output were aligned to the human GRCh38 reference genome using STAR algorithm 2.7.3a.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Bulk RNAseq of mouse substantia nigra of wild type and PINK1 KO mice after C.rodentium infection

0.00

Stratton, Jo Anne · Mukherjee, Sriparna · Trudeau, Louis-Eric

1 files · 5.0 KB · pdf

We performed bulk RNAsequencing of substantia nigra from wild type and PINK1 KO mice 26-days post C.rodentium infection. This dataset contains raw fastq files from striatal cells, sorted into 4 groups namely wild type and PINK1 KO uninfected and infected mice. Sequencing was performed using NextSeq500. FASTQs generated from sequencing output were aligned to the mm10 reference genome using STAR aligner.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Bulk RNAseq of mouse striatum of wild type and PINK1 KO mice after C.rodentium infection

0.00

Stratton, Jo Anne · Mukherjee, Sriparna · Trudeau, Louis-Eric

1 files · 6.1 KB · pdf

We performed bulk RNAsequencing of striatum from wild type and PINK1 KO mice 26-days post C.rodentium infection. This dataset contains raw fastq files from striatal cells, sorted into 4 groups namely wild type and PINK1 KO uninfected and infected mice. Sequencing was performed using NextSeq500. FASTQs generated from sequencing output were aligned to the mm10 reference genome using STAR aligner.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Single-cell RNAseq of human iPSC-derived wild type and PINK1 KO myeloid cells after lipopolysaccharide and interleukin-1 beta challenge

0.00

Recinto, Sherilyn · Stratton, Jo Anne

1 files · 6.1 KB · pdf

We performed 10X Genomics single-cell RNAsequencing of human iSPC-derived monocytes and macrophages in vitro. Cells were treated with 500 ng/mL lipopolysaccharide (LPS) and 50 ng/mL interleukin-1 beta (IL1b) for 24 hours. This dataset contains raw FASTQ files from myeloid cells, sorted into 4 groups namely monocytes (Mono) and Macrophages (Mac) non-stimulated (NS) and LPS+IL1b-stimulated cells. Sequencing was performed using NovaSeq 6000 S4 PE 100bp. Reads were processed using the 10X Genomics Cell Ranger Single Cell 2.0.0 pipeline. FASTQs generated from sequencing output were aligned to the human GRCh38 reference genome using STAR algorithm 2.7.3a.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Single-cell RNAseq of lamina propria in wild type and LRRK2 G2019S mice after C. rodentium infection

0.00

Recinto, Sherilyn · Stratton, Jo Anne · Pei, Jessica · et al.

2 files · 6.0 KB · pdf

We performed 10X Genomics single-cell RNAsequencing of colonic lamina propria cells from wild type and LRRK2 G2019S mice following 1-week post C. rodentium infection. The cells were pooled from 3 mice per group of both sexes at 8-12 weeks of age. This dataset contains raw FASTQ files from mouse colonic lamina propria, sorted into 4 groups namely wild type and LRRK2 G2019S uninfected and infected mice. Sequencing was performed using NovaSeq 6000 S4 PE 100bp. Reads were processed using the 10X Genomics Cell Ranger Single Cell 2.0.0 pipeline. FASTQs generated from sequencing output were aligned to the mouse GRCm38 reference genome using STAR algorithm 2.7.3a.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Single-cell RNAseq of colonic lamina propria in wild type and PINK1 KO mice after C. rodentium infection

0.00

Recinto, Sherilyn · Stratton, Jo Anne

1 files · 5.7 KB · pdf

We performed 10X Genomics single-cell RNA sequencing of colonic lamina propria cells from wild type and PINK1 KO mice following either 1-week or 2-weeks post C. rodentium infection. The cells were pooled from 3 mice per group of both sexes at 8-12 weeks of age. This dataset contains raw FASTQ files from mouse colonic lamina propria, sorted into 8 groups namely wild type and PINK1 KO uninfected and infected mice at 1- or 2-weeks post-infection. Sequencing was performed using NovaSeq 6000 S4 PE 100bp. Reads were processed using the 10X Genomics Cell Ranger Single Cell 2.0.0 pipeline. FASTQs generated from sequencing output were aligned to the mouse GRCm38 reference genome using STAR algorithm 2.7.3a.

open·CC-BY-4.0·zenodo-bio·completeSource
modal

Data for "Reconstructing Europa's atmosphere from H2+ pickup ions detected during the Juno PJ45 flyby"

0.00

Carberry Mogan, Shane

1 files · 17 MB · pdf

This archive contains all data products and Python scripts required to reproduce the figures presented in: Carberry Mogan et al. (2026): "Reconstructing Europa's atmosphere from H2+ pickup ions detected during the Juno PJ45 flyby".

open·CC-BY-4.0·Zenodo·completeSource
modal

"ATHLETIC PERFORMANCE ANALYTICS IN COMBAT SPORTS: CAN DATA-DRIVEN METHODS TRANSFORM HOW FIGHTERS TRAIN AND COMPETE?"

0.00

Rakhimxon Bakhodirxonov

1 files · 595 KB · pdf

open·CC-BY-4.0·Zenodo·completeSource
modal

Dataset For "AUDIT TRANSPARANSI INFORMED CONSENT: ANALISIS KEPATUHAN KEBIJAKAN PRIVASI PLATFORM LAYANAN STREAMING VIDEO (OVER-THE-TOP) DI INDONESIA TERHADAP UU PDP NOMOR 27 TAHUN 2022"

0.00

Putri Lenggo Genni · Tavasya Alia Anjani · Muhammad Fasha Asshofa

3 files · 2.8 MB · csv, pdf, xlsx

open·CC-BY-4.0·Zenodo·completeSource
sequence

Trypanosoma cruzi (Dm28c) genome

0.00

Requena Rolanía, Jose María · Greif, Gonzalo · ROBELLO, CARLOS

1 files · 8.0 MB · fasta

This dataset contains the genome sequence for Trypanosoma cruzi (strain Dm28c). This genome sequence was de novo assembled using PacBio Hi-Fi and Illumina sequencing platforms by Greif et al (2026. PMID: 41501640). The genome was assembled into 32 contigs, which represent complete chromosomes. The provided Fasta file also contains an additional contig corresponding to the maxicircle (mitochondrial genome) sequence. The Fasta files included in this dataset were downloaded from GenBank (assembly GCA_044048535.1; May 22, 2026). Additional information about the Dm28cT2T genome assembly and gene annotations may be accessed through the link: https://cruzi.pasteur.uy/

open·CC-BY-4.0·zenodo-bio·completeSource
sequence

Multiple sequence alignment, phylogenetic tree, and domain-level annotation of Cas7 homologs

0.00

Burman, Nathaniel · Buyukyoruk, Murat · Wiegand, Tanner · et al.

4 files · 8.0 MB · fasta

This folder contains a multiple sequence alignment of Cas7 homologs in .fasta format, the domain-level annotations from PFAM and CasFinder, and an associated phylogenetic tree in .newick format.

open·CC-BY-4.0·zenodo-bio·completeSource
composite

2024-04-08 Total Solar Eclipse ESID#292

0.00

Winter, Henry · Severino, MaryKay · Volunteer Scientist

16 files · 100 MB · csv, pdf, zip

These are audio recordings taken by an Eclipse Soundscapes (ES) Data Collector during the week of the April 08, 2024 Total Solar Eclipse. It was decided to include only raw, unprocessed audio data files in each site-specific ZIP archive and in each Zenodo record. This decision was so that any researcher can independently verify, reproduce, and extend the analysis performed. As a result, some sites have WAV files with 0 bytes of data or timestamps outside the range of probable recording times. Procedures used by the Eclipse Soundscapes team to process audio data for its purposes are outlined in the Data Management reports located in the Eclipse Soundscapes Zenodo community. Data with 0 bytes of data were included for completeness. Data Site location information: Latitude: 44.46311 Longitude: -71.68203 Local Eclipse Type: Total Solar Eclipse Solar Eclipse Eclipse Percent (%): 100 WAV files Time & Date Settings: Set with Automated AudioMoth Time Chime (More information on TimeStamp Setting below) Data Collector Start Time Notes: N/A Included Data: Audio files in WAV format with the date and time in UTC within the file name: YYYYMMDD_HHMMSS meaning YearMonthDay_HourMinuteSecond For example, 20240411_141600.WAV means that this audio file starts on April 11, 2024 at 14:16:00 Coordinated Universal Time (UTC) CONFIG Text file: Includes AudioMoth device setting information, such as sample rate in Hertz (Hz), gain, firmware, etc. README.md: Markdown formatted file with information about the recording and recording site. file_list.csv: A machine and human file that gives the following information on each file in the record: File Name, File Type, Description, File Size in kilobytes, Name of Associated Data Dictionary with the file, calculated SHA-512 Hash of the file as a unique identifier to insure data integrity during transfer and compression. total_eclipse_data.csv: A machine and human readable file that gives the following information about the site where the audio data recording was taken: ESID#, Latitude, Longitude, Eclipse_type, CoveragePercent, Eclipse Start UTC (1st contact), Totality Start UTC (2nd contact), Totality End UTC (3rd Contact), Eclipse End UTC (4th Contact), Max Eclipse Time UTC License.txt: A human readable file that explains the terms and conditions under which the data can be used. AudioMoth_Operation_Manual.pdf: A human readable document that explains the use of an AudioMoth device. The document is current up to the time of the AudioMoth's use in the Eclipse Soundscapes project. file_list_data_dict.csv: A machine and human data dictionary file that gives information on the variables contained within the file_list.csv file. CONFIG_data_dict.csv: A machine and human data dictionary file that gives information on the variables contained within the CONFIG.TXT file. eclipse_data_data_dict.csv: A machine and human data dictionary file that gives information on the variables contained within the total_eclipse_data.csv file. WAV_data_dict.csv: A machine and human data dictionary file that gives information on the variables contained within the *.WAV files. ES_Data_Management_Pre-Eclipse_Data_Infrastructure_Stage_0.pdf: PDF document that describes Stage 0 (Pre-Eclipse Infrastructure and Data Stewardship Planning) of the Eclipse Soundscapes (ES) data lifecycle. ES_Data_Management_Receipt_Sorting_and_Metadata_Organization_Stage_1.pdf: PDF document that describes Stage 1 (Receipt, Sorting, and Metadata Organization) of the Eclipse Soundscapes (ES) data lifecycle. ES_Data_Management_Data_Processing_Stage_2.pdf: PDF document that describes Stage 2 (Data Processing) of the Eclipse Soundscapes (ES) data Volunteer Scientists. 2023 and 2024 solar eclipse soundscapes audio datalifecycle. ES_Data_Management_Data_Sharing_Stage_3.pdf: PDF document that describes Stage 3 (Public Data Sharing) of the Eclipse Soundscapes (ES) data lifecycle. Eclipse Information for this location: Eclipse Date: April 08, 2024 Eclipse Start Time (UTC) (1st Contact): 18:16:15 Totality Start Time (UTC) (2nd Contact): [N/A if partial eclipse] 19:28:56 Eclipse Maximum Time [when the most possible amount of the Sun in blocked] (UTC): 19:29:25 Totality End Time (UTC) (3rd Contact): [N/A if partial eclipse] 19:29:53 Eclipse End Time (UTC) (4th Contact): [N/A if partial eclipse] 20:38:30 Audio Data Collection During Eclipse Week ES Data Collectors used AudioMoth devices to record audio data, known as soundscapes, over a 5-day period during the eclipse week: 2 days before the eclipse, the day of the eclipse, and 2 days after. The complete raw audio data collected by the Data Collector at the location mentioned above is provided here. This data may or may not cover the entire requested timeframe due to factors such as availability, technical issues, or other unforeseen circumstances. ES ID# Information: Each AudioMoth recording device was assigned a unique Eclipse Soundscapes Identification Number (ES ID#). This identifier connects the audio data, submitted via a MicroSD card, with the latitude and longitude information provided by the data collector through an online form. The ES team used the ES ID# to link the audio data with its corresponding location information and then uploaded this raw audio data and location details to Zenodo. This process ensures the anonymity of the ES Data Collectors while allowing them to easily search for and access their audio data on Zenodo. TimeStamp Information: The ES team and the Data Collectors took care to set the date and time on the AudioMoth recording devices using an AudioMoth time chime before deployment, ensuring that the recordings would have an automatic timestamp. However, participants also manually noted the date and start time as a backup in case the time chime setup failed. The notes above indicate whether the WAV audio files for this site were timestamped manually or with the automated AudioMoth time chime. Common Timestamp Error: Some AudioMoth devices experienced a malfunction where the timestamp on audio files reverted to a date in 1970 or before, even after initially recording correctly. Despite this issue, the affected data was still included in this ES site's collected raw audio dataset. Latitude & Longitude Information: The latitude and longitude for each site was taken manually by data collectors and submitted to the ES team, either via a web form or on paper. It is shared in Decimal Degrees format. General Project Information: The Eclipse Soundscapes Project is a NASA Volunteer Science project funded by NASA Science Activation that is studying how eclipses affect life on Earth during the October 14, 2023 annular solar eclipse and the April 8, 2024 total solar eclipse. Eclipse Soundscapes revisits an eclipse study from almost 100 years ago that showed that animals and insects are affected by solar eclipses! Like this study from 100 years ago, ES asked for the public's help. ES uses modern technology to continue to study how solar eclipses affect life on Earth! Eclipse Soundscapes is an enterprise of ARISA Lab, LLC and is supported by NASA award No. 80NSSC21M0008. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Aeronautics and Space Administration. Eclipse map/figure/table/predictions courtesy of Fred Espenak, NASA/Goddard Space Flight Center, from eclipse.gsfc.nasa.gov . Eclipse Data Version Definitions {1st digit = year, 2nd digit = Eclipse type (1=Total Solar Eclipse, 9=Annular Solar Eclipse, 0=Partial Solar Eclipse), 3rd digit is unused and in place for future use} 2023.9.0 = Week of October 14, 2023 Annular Eclipse Audio Data, Path of Annularity (Annular Eclipse) 2023.0.0 = Week of October 14, 2023 Annular Eclipse Audio Data, OFF the Path of Annularity (Partial Eclipse) 2024.1.0 = Week of April 8, 2024 Total Solar Eclipse Audio Data, Path of Totality (Total Solar Eclipse) 2024.0.0 = Week of April 8, 2024 Total Solar Eclipse Audio Data , OFF the Path of Totality (Partial Solar Eclipse) *Please note that this dataset's version number is listed below. Eclipse Soundscapes Data Collector Role Training and Implementation Resources Manual (2023-2024) (Archival Copy) This site-level record includes the Eclipse Soundscapes Data Collector Role Training and Implementation Resources Manual (2023-2024) . The manual documents the participant training, device setup procedures, metadata submission requirements, ES ID system, timestamp protocols, data return workflow, and public archiving processes used during the October 14, 2023 annular solar eclipse and the April 8, 2024 total solar eclipse. The manual is preserved for transparency and reproducibility and reflects the procedures under which this dataset was collected and processed. (DOI 10.5281/zenodo.18623442) Data Receipt, Processing, and Analysis Methods All programs supporting Stages 1–3 are openly available in the: Eclipse Soundscapes GitHub repository: https://github.com/ARISA-Lab-LLC/ESCSP Data Management Lifecycle The following section documents the relationship of this record to the full Eclipse Soundscapes (ES) data lifecycle, a multi-stage workflow designed to support large-scale participatory science, long-term data stewardship, open science, and scientific reuse. Each stage addressed a different operational need, beginning before eclipse deployment and continuing through validation, public archiving, and scientific analysis. Together, these stages transformed distributed volunteer-submitted audio recordings into structured, documented, publicly accessible NASA-funded research assets. Stage 0: Pre-Eclipse Infrastructure and Deployment Preparation Severino, M., & Winter, H. (2026). Eclipse Soundscapes Data Management: Pre-Eclipse Infrastructure and Deployment Preparation (Stage 0). Zenodo. https://doi.org/10.5281/zenodo.20413370 Stage 0 focused on building the operational foundation required to support geographically distributed eclipse data collection at national scale. This stage included AudioMoth device preparation, accessibility modifications, ES ID # assignment systems, metadata collection workflows, participant training materials, deployment logistics, and planning for downstream data stewardship and archival workflows. The 2023 annular eclipse served as both a scientific investigation and a large-scale operational beta test that informed improvements for the 2024 total solar eclipse campaign. Related Citations and Resources: Severino, M., & Kline, T. (2025, November 24). Eclipse Soundscapes Apprentice Role Curriculum: Solar Eclipses and Multi-Sensory Observing (Informal Education). Zenodo. https://doi.org/10.5281/zenodo.17703003 Severino, M., & Bauer, D. J. (2026). Eclipse Soundscapes Observer Role Training and Resources Manual (2023–2024). Zenodo. https://doi.org/10.5281/zenodo.18633602< /li> Severino, M., Winter, H., & Bauer, D. J. (2026). Eclipse Soundscapes Data Collector Role Training and Implementation Manual (2023–2024). Zenodo. https://doi.org/10.5281/zenodo.18623443 Stage 1: Receipt, Sorting, and Metadata Organization Severino, M., & Winter, H. (2026). Eclipse Soundscapes Data Management: Receipt, Sorting, and Metadata Organization (Stage 1). Zenodo. https://doi.org/10.5281/zenodo.19471425 Stage 1 transformed returned participant materials into organized, traceable site-level records. This included receiving mailed microSD cards, consolidating participant-submitted metadata, reconciling handwritten and online records, organizing physical audio media by ES ID #, and deriving eclipse timing and coverage information using NASA eclipse prediction datasets. The outputs of Stage 1 established the structured metadata relationships required for downstream validation, processing, archiving, and analysis workflows. Related Citations and Resources: Winter, H., & Goncalves, J. (2026). EPTT (Eclipse Phase Timing Tool) [Computer software]. GitHub. https://github.com/ARISA-Lab-LLC/ESCSP-Eclipse-Phase-Timing-Tool /li> Espenak, F. (n.d.). Eclipse predictions by Fred Espenak, NASA's GSFC Eclipse Web Site. NASA Goddard Space Flight Center. http://eclipse.gsfc.nasa.gov/eclipse.html Stage 2: Data Processing and Validation Severino, M., & Winter, H. (2026). Eclipse Soundscapes Data Management: Data Processing (Stage 2). Zenodo. https://doi.org/10.5281/zenodo.18683402 Stage 2 focused on centralized audio ingestion, validation, timestamp verification, metadata reconciliation, and preparation of datasets for analysis and public sharing. During this stage, returned audio recordings were processed using custom open-source tools developed by the ES team, including ES WAVES and ES AMES. The project implemented scalable infrastructure capable of processing large volumes of participant-submitted microSD cards while preserving all raw audio data without modification. Stage 2 established the validated dataset structure required for long-term preservation and scientific analysis. Related Citations and Resources: Winter, H., & Goncalves, J. (2026). ES WAVES (Eclipse Soundscapes WAV Audio Validation & Extraction Suite) [Computer software]. GitHub. https://github.com/ARISA-Lab-LLC/ESCSP-ES-WAV-Audio-Validation-Extraction-Suite Winter, H., & Goncalves, J. (2026). ES AMES (Eclipse Soundscapes AudioMoth Metadata Extractor Suite) [Computer software]. GitHub. https://github.com/ARISA-Lab-LLC/ESCSP-ES-AMES-AudioMoth-Metadata-Extractor-Suite Stage 3: Public Data Sharing and Open Archiving Severino, M., & Winter, H. (2026). Eclipse Soundscapes Data Management: Public Audio Data Sharing (Stage 3). Zenodo. https://doi.org/10.5281/zenodo.18683437 Stage 3 transformed validated site-level datasets into publicly archived, DOI-assigned research records published through the Eclipse Soundscapes Zenodo Community. This stage included dataset packaging, metadata standardization, README generation, integrity verification, DOI assignment, and automated repository upload workflows using the Automated Zenodo Upload Software (AZUS). These workflows established the project's long-term open-science infrastructure and ensured that datasets remained findable, accessible, interoperable, reusable, and citable for future scientific and educational use. Related Citations and Resources: Winter, H., & Goncalves, J. (2026). AZUS (Automated Zenodo Upload Software) [Computer software]. GitHub. https://github.com/ARISA-Lab-LLC/AZUS-Automated-Zenodo-Upload-Software Stage 4: Scientific Analysis and Research Use Stage 4 involves the scientific analysis and interpretation of validated eclipse soundscape datasets. Analysis workflows utilized datasets verified during earlier stages to investigate eclipse-related environmental and animal vocalization changes across hundreds of recording sites. This stage also includes broader scientific interpretation, publication development, and continued reuse of Eclipse Soundscapes datasets and infrastructure for future research, education, and open-science applications. Related Citations and Resources: Pease, B., Gilbert, N., & Severino, M. (2026). Eclipse Soundscapes Preliminary Findings – How Eclipses Affect Nature as determined by Sound (Recorded Webinar). Zenodo. https://doi.org/10.5281/zenodo.18613979 Gilbert, N. A., Pease, B. S., Severino, M., & Winter, H. III. (2026). Photic niche explains avian behavioral responses to solar eclipses. Ecology and Evolution, 16(2), e73090. https://doi.org/10.1002/ece3.73090 Analysis code repository: https://github.com/BrentPease1/eclipse-traits Companion Zenodo record archiving structured analysis scripts and derived outputs: https://doi.org/10.5281/zenodo.15790879[r] Public Archiving, Privacy, and Data Transparency The Eclipse Soundscapes Data Collector Role Training and Implementation Manual (2023-2024) includes a detailed explanation of how Eclipse Soundscapes audio data are publicly archived on Zenodo, how participant privacy is protected through the ES ID system, and how transparency and traceability are maintained. It also outlines the criteria for determining which recordings are included in the public archive, as well as the distinction between publicly shared archival data and datasets used for ES-led scientific analyses. Participants and data users can consult this section for full documentation of the project's open science and privacy practices. Severino, M., & Winter, H. (2026). Eclipse Soundscapes Data Collector Role Training and Implementation Manual (2023–2024). Zenodo. https://doi.org/10.5281/zenodo.18623443 Citations Individual Site Citation: APA Citation (7th edition) Winter, H., Severino, M., & Volunteer Scientist. (2026). 2024 solar eclipse soundscapes audio data [Audio dataset, ES ID# 292]. Zenodo.{Insert DOI} Collected by volunteer scientists as part of the Eclipse Soundscapes Project. This project is supported by NASA award No. 80NSSC21M0008. Eclipse Community Citation Winter, H., Severino, M., & Volunteer Scientists. 2023 and 2024 solar eclipse soundscapes audio data [Collection of audio datasets]. Eclipse Soundscapes Community, Zenodo. https://zenodo.org/communities/eclipsesoundscapes/ Collected by volunteer scientists as part of the Eclipse Soundscapes Project This project is supported by NASA award No. 80NSSC21M0008.

open·CC-BY-4.0·Zenodo·completeSource
composite

Fast Breakdowns Observed in the Initial Leaders of Two Energetic Compact Strokes

0.00

Yang, Qingliu

6 files · 8.0 MB · bzip2

Dataset Description This dataset contains 3D lightning location results, DALMA and FALMA waveform for two Energetic Compact Stroke (ECS) events. location results are included: HF3D_1732785151.dat - 3D lightning locations for the ECS leader A flash. HF3D_1734785454.dat - 3D lightning locations for the ECS leader B flash. The timestamp 1734785454 and 1732785151 corresponds to the occurrence time of the lightning flash in Japan Standard Time. File format and parameters The first row contains the lightning occurrence time. Column descriptions: Time (ms) - time relative to the lightning source. X, Y, Z (m) - 3D spatial coordinates relative to ground level. The origin (0, 0, 0) corresponds to latitude 36.76°N and longitude 136.76°E. FALMA and DALMA waveform ECSLeaderA_DALMA_waveform.bz2 is DALMA waveform of Leader A. ECSLeaderA_FALMA_waveform.bz2 is FALMA waveform of Leader A. ECSLeaderB_DALMA_waveform.bz2 is DALMA waveform of Leader B. ECSLeaderB_FALMA_waveform.bz2 is FALMA waveform of Leader B. This dataset allows analysis of the spatial and temporal development of these two ECS flashes.

open·CC-BY-4.0·Zenodo·completeSource
tabular

Generated ASO features for the OligoAI dataset

0.00

Kovaliov, Michael

1 files · 100 MB · parquet

open·CC-BY-4.0·Zenodo·completeSource
declared

Source data for: Overexpression of SlMPBQMT (VTE3) enhances α-tocopherol accumulation and reduces oxidative stress in tomato

0.00

Kim, Ah Young · Kim, Jin Su · Ko, Jung Yun · et al.

3 files · 307 KB · pdf, xlsxdeclared

This dataset contains the source data associated with the manuscript entitled "Overexpression of SlMPBQMT (VTE3) enhances α-tocopherol accumulation and reduces oxidative stress in tomato." The uploaded files include the original experimental data used to generate the figures and analyses presented in the manuscript, including: HPLC quantification of α-tocopherol. Plant phenotype measurements. qRT-PCR expression data. DAB and NBT staining quantification data. These data are provided to ensure transparency, reproducibility, and compliance with the data availability policy of BMC Plant Biology .

open·CC-BY-4.0·Zenodo·completeSource
declared

When an Asset Does Not Pay for Itself

0.00

Bell, Peter

2 files · 14 MB · pdf, zipdeclared

This working paper asks how Canada should assess strategic resource infrastructure that may not earn a commercial return on its own. A road, port, power system, pipeline, smelter, or processing plant can appear uneconomic when evaluated as an individual asset while still enabling new production, preserving difficult-to-replace processing capacity, supporting several users, or improving security of supply. The paper develops a framework for deciding when public support for such an asset may be justified. Its central rule is that an asset-level loss is defensible only when it produces wider benefits that are specific, measurable, and subject to effective public oversight. The analysis draws on Canadian wartime industrial mobilization, concentration in critical-mineral supply chains, proposed support for processing capacity at Trail, current infrastructure and northern development programs, and cautionary cases involving mining subsidies, managed decline, remote transport, and major-project governance. The paper converts the argument into a twelve-question approval test and a measurement framework for tracking public cost, avoided closure, new production, secure supply, shared infrastructure use, and signs of failure. It does not recommend a particular project and does not argue that all loss-making assets deserve public support. Its purpose is to distinguish infrastructure that creates durable public value from subsidy, bailout, or white-elephant risk.

open·CC-BY-4.0·Zenodo·completeSource
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Stylistic boundaries of the Pastoral Epistles within the Pauline corpus: A sensitivity-oriented machine learning analysis

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Anazawa, Katsuro

1 files · 11 MB · pdfdeclared

The authorship of the Pauline epistles, particularly the Pastoral Epistles (1 and 2 Timothy and Titus), remains contested in biblical scholarship. Quantitative stylometry can contribute to this debate, but supervised approaches risk circular reasoning when they depend on predefined "core Pauline" labels, and lexical measures risk topic bias when distinctive vocabulary reflects subject matter rather than authorial style. This study proposes a transparent, sensitivity-oriented workflow for examining stylistic boundaries within the New Testament corpus. Using lemmatized Greek texts, it combines BM25 weighting, principal component analysis, hierarchical and k-means clustering, sensitivity analysis across alternative definitions of the Core Pauline letters, function-word-only analysis, and SHAP-based model interpretation. The results show that the Pastoral Epistles consistently occupy a region of stylometric space distinct from the Core Pauline letters; Deutero-Pauline letters tend to occupy a more intermediate position, while the Pastorals remain in the lowest tier of relative Core-likeness across core definitions. The pattern persists when content vocabulary is removed, suggesting that the observed divergence is not solely attributable to a topic-specific lexicon. The study does not claim to determine historical authorship definitively, especially given the absence of an externally verified Pauline stylome. Instead, it provides convergent quantitative evidence for a stable stylistic boundary that any historical account of the Pastorals-single-author, amanuensis-mediated, Pauline-school, or pseudonymous-must explain. The workflow illustrates how explainable machine learning can support transparent and reproducible stylometric analysis in small historical corpora. An earlier extended version is available at https://doi.org/10.5281/zenodo.18503648.

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Influence of Mobile Learning Apps and Academic Performance of High School Students

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Dr. Ratheeswari K · Prof. Vasimalairaja M

1 files · 256 KB · pdfdeclared

Mobile learning apps have become a significant tool in modern education, especially for high school students. This study examines the influence of mobile learning apps on the academic performance of high school students in Dindigul District, considering factors such as gender, locality, school management type, and medium of instruction. A sample of 400 students was selected, comprising 180 males and 220 females, 220 from urban areas and 180 from rural areas, 190 from government schools and 210 from private schools, and 185 Tamil-medium and 215 English-medium students. The findings suggest that mobile learning apps positively impact academic performance, with variations observed across different demographic groups. The study highlights the potential of mobile learning in bridging educational gaps and recommends tailored approaches to maximize its benefits.

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