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hybrid · semantic + lexical · 2 datasets ranked · 0.56s

Structurecomposite1
Depthcataloged1measured1
Licenseopen2
Accessopen2
Formatcsv1fasta1fastq1gzip1pdf1
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clear
1-2 of 2sortrelevancemeasured firstqualitysize
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Raw data for 'Microbiota-constrained bacterial density limits phage infection in the gut and allows persistence of susceptible cells'

0.00

Bertola, Anouk · Wenner, Nicolas · LEMOS ROCHA, Leonardo Filipe · et al.

sqlite1
xlsx1
16 files · 8.0 MB · fastq, gzip, xlsx

Sequencing data and raw data for Bertola et al .

open·CC-BY-4.0·Zenodo·completeSource
declared

Software and AMR peptide database for 'PEPTiGEN: a tool for mining antimicrobial resistance PEPTides using GENe data of public available repositories'

0.00

Meekes, Lisa · Tabaro, Francesco · Bexkens, Michiel · et al.

41 files · 8.2 GB · csv, fasta, pdfdeclared

This record contains the Python software for PEPTiGEN, a tool for generating tryptic peptides from prokaryotic gene sequences and their variants, and the associated antimicrobial resistance (AMR) peptide database. The database is provided as an SQL file and a CSV file containing all genes and predicted peptides. The README file contains explanation of the PEPTiGEN tool. The SQL database schema files contains both the database schema of the SQL database used in the PEPTiGEN analysis as the database schema of the AMR peptide datbase.

open·CC-BY-4.0·Zenodo·completeSource

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